Small Molecule Discovery and Design

Small Molecule Discovery and Design

Small Molecule Discovery and Design

Simulate and analyze your compounds to discover and optimize leads

Simulate and analyze your compounds to discover and optimize leads

Assess Binding

Compute protein-ligand binding affinities

  • Dock compounds to known binding sites, or identify binding sites computationally

  • All-Atom structure prediction for protein-small molecule co-folding


Assess Binding

Compute protein-ligand binding affinities

  • Dock compounds to known binding sites, or identify binding sites computationally

  • All-Atom structure prediction for protein-small molecule co-folding


Assess Binding

Compute protein-ligand binding affinities

  • Dock compounds to known binding sites, or identify binding sites computationally

  • All-Atom structure prediction for protein-small molecule co-folding


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Molecular dynamics

Physics-based simulation to predict properties for your system

  • Simple interface to molecular protein-ligand dynamics

  • Absolute and relative free energy calculations for hundreds of compounds

  • Compute binding affinity between ligands and protein targets using Relative and Absolute Binding Free Energies


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Molecular dynamics

Build effortless. Customize superfast.

  • Simple interface to molecular protein-ligand dynamics

  • Absolute and relative free energy calculations for hundreds of compounds

  • Compute binding affinity between ligands and protein targets using Relative and Absolute Binding Free Energies


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Molecular dynamics

Scalable physics-based simulation to predict properties for your protein-ligand system

  • Simple interface to molecular protein-ligand dynamics

  • Absolute and relative free energy calculations for hundreds of compounds

  • Compute binding affinity between ligands and protein targets using Relative and Absolute Binding Free Energies


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Generate

De novo compounds from your existing data

  • Design synthesizable compound starting from a library

  • Given a binding pocket structure, generate new small molecule binders

  • Decorate scaffolds for in silico library creation


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Generate

Smooth look. Shiny creations.

  • Design synthesizable compound starting from a library

  • Given a binding pocket structure, generate new small molecule binders

  • Decorate scaffolds for in silico library creation


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Generate

De novo compounds based on your existing data

  • Design synthesizable compound starting from a library

  • Given a binding pocket structure, generate new small molecule binders

  • Decorate scaffolds for in silico library creation


SAR Analysis

Structure-activity relationship analysis with Free Wilson

  • Find promising combinations of substituents that haven’t been synthesized

  • Score substituent combinations

SAR Analysis

Structure-activity relationship analysis with Free Wilson

  • Find promising combinations of substituents that haven’t been synthesized

  • Score substituent combinations

SAR Analysis

Structure-activity relationship analysis with Free Wilson

  • Find promising combinations of substituents that haven’t been synthesized

  • Score substituent combinations